Technological Development and Advances for Constructing and Analyzing Plant Pangenomes.

doi:10.1093/gbe/evae081

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Technological Development and Advances for Constructing and Analyzing Plant Pangenomes.

Genome biology and evolution - 2 Apr 2024

Hu Haifei, Li Risheng, Zhao Junliang, Batley Jacqueline, Edwards David

Abstract excerpt

A pangenome captures the genomic diversity for a species, derived from a collection of genetic sequences of diverse populations. Advances in sequencing technologies have given rise to three primary methods for pangenome construction and analysis: de novo assembly and comparison, reference genome-based iterative assembly, and graph-based pangenome construction. Each method presents advantages and challenges in...

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PMID: 38669452
DOI: 10.1093/gbe/evae081
PMCID: PMC11058698

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