Article
Rational strain design with minimal phenotype perturbation.
Nature communications - 24 Jan 2024
Narayanan Bharath, Weilandt Daniel, Masid Maria, Miskovic Ljubisa, Hatzimanikatis Vassily
Abstract excerpt
Devising genetic interventions for desired cellular phenotypes remains challenging regarding time and resources. Kinetic models can accelerate this task by simulating metabolic responses to genetic perturbations. However, exhaustive design evaluations with kinetic models are computationally impractical, especially when targeting multiple enzymes. Here, we introduce a framework for efficiently scouting the design...
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