Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Semiparametric inference of effective reproduction number dynamics from wastewater pathogen surveillance data

1 Jul 2024

Abstract excerpt

Concentrations of pathogen genomes measured in wastewater have recently become available as a new data source to use when modeling the spread of infectious diseases. One promising use for this data source is inference of the effective reproduction number, the average number of individuals a newly infected person will infect. We propose a model where new infections arrive according to a time-varying immigration...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to COVID-19 epidemiological studies
Share to SARS-CoV-2 and COVID-19 Research
Share to SARS-CoV-2 detection and testing

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Source

Identifiers

PMID: 37693183
DOI: 10.1093/biomtc/ujae074

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 9 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Semiparametric inference of effective reproduction number dynamics from wastewater pathogen surveillance dataPMID 37693183Read ↗

A Wastewater-Based Epidemic Model for SARS-CoV-2 with Application to Three Canadian CitiesSemantic proximity Read ↗

“Real-time county-aggregated wastewater-based estimates for SARS-CoV-2 effective reproduction numbers”Semantic proximity Read ↗

Estimated transmission dynamics of SARS-CoV-2 variants from wastewater are unbiased and robust to differential sheddingSemantic proximity Read ↗

Estimated transmission dynamics of SARS-CoV-2 variants from wastewater are unbiased and robust to differential sheddingSemantic proximity Read ↗

estimateR: an R package to estimate and monitor the effective reproductive numberSemantic proximity Read ↗

Time-varying reproduction number estimation: Fusing compartmental models with generalised additive modelsSemantic proximity Read ↗

EpiFusion: Joint inference of the effective reproduction number by integrating phylodynamic and epidemiological modelling with particle filteringSemantic proximity Read ↗

Wastewater-informed neural compartmental model for long-horizon case number projectionsSemantic proximity Read ↗

Challenges in the case-based surveillance of infectious diseasesSemantic proximity Read ↗

A multi-scale model to evaluate airport wastewater surveillance and ICU genomic monitoring for pandemic preparednessSemantic proximity Read ↗

Modeling the Growth and Decline of Pathogen Effective Population Size Provides Insight into Epidemic Dynamics and Drivers of Antimicrobial ResistanceSemantic proximity Read ↗

Efficient Surveillance and Temporal Calibration of Disease ResponseSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.