Article
Restriction site-associated DNA sequencing technologies as an alternative to low-density SNP chips for genomic selection: a simulation study in layer chickens.
BMC genomics - 19 May 2023
Herry Florian, Hérault Frédéric, Lecerf Frédéric, Lagoutte Laëtitia, Doublet Mathilde, Picard-Druet David, Bardou Philippe, Varenne Amandine, Burlot Thierry, Le Roy Pascale, Allais Sophie
Abstract excerpt
BACKGROUND: To reduce the cost of genomic selection, a low-density (LD) single nucleotide polymorphism (SNP) chip can be used in combination with imputation for genotyping selection candidates instead of using a high-density (HD) SNP chip. Next-generation sequencing (NGS) techniques have been increasingly used in livestock species but remain expensive for routine use for genomic selection. An alternative and...
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