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Article

Insane in the vembrane: filtering and transforming VCF/BCF files.

Bioinformatics (Oxford, England) - 1 Jan 2023

Hartmann Till, Schröder Christopher, Kuthe Elias, Lähnemann David, Köster Johannes

Abstract excerpt

SUMMARY: We present vembrane as a command line variant call format (VCF)/binary call format (BCF) filtering tool that consolidates and extends the filtering functionality of previous software to meet any imaginable filtering use case. Vembrane exposes the VCF/BCF file type specification and its inofficial extensions by the annotation tools VEP and SnpEff as Python data structures. vembrane filter enables...

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PMID: 36519840
DOI: 10.1093/bioinformatics/btac810
PMCID: PMC9825764

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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