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Article

Understanding Mendelian errors in SNP arrays data using a Gochu Asturcelta pig pedigree: genomic alterations, family size and calling errors.

Scientific reports - 16 Nov 2022

Arias Katherine D, Álvarez Isabel, Gutiérrez Juan Pablo, Fernandez Iván, Menéndez Juan, Menéndez-Arias Nuria A, Goyache Félix

Abstract excerpt

Up to 478 Gochu Asturcelta pig parents-offspring trios (61 different families) were genotyped using the Axiom_PigHDv1 Array to identify the causes of Mendelian errors (ME). Up to 545,364 SNPs were retained. Up to 40,540 SNPs gathering 292,297 allelic mismatches were identified and were overlapped with SINEs and LINEs (Sscrofa genome 11.1). Copy number variations (CNV) were called using PennCNV. ME were classified...

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Identifiers

PMID: 36385499
DOI: 10.1038/s41598-022-24340-0
PMCID: PMC9668983

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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