Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

EagleImp: fast and accurate genome-wide phasing and imputation in a single tool.

Bioinformatics (Oxford, England) - 15 Nov 2022

Wienbrandt Lars, Ellinghaus David

Abstract excerpt

MOTIVATION: Reference-based phasing and genotype imputation algorithms have been developed with sublinear theoretical runtime behaviour, but runtimes are still high in practice when large genome-wide reference datasets are used. RESULTS: We developed EagleImp, a software based on the methods used in the existing tools Eagle2 and PBWT, which allows accurate and accelerated phasing and imputation in a single tool...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Genome
Share to Genome-Wide Association Study
Share to Genotype

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Haplotypes

Share to Polymorphism, Single Nucleotide

Share to Software

Source

Open in PubMed Open full text

Identifiers

PMID: 36130053
DOI: 10.1093/bioinformatics/btac637
PMCID: PMC9665855

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

EagleImp: fast and accurate genome-wide phasing and imputation in a single tool.PMID 36130053Read ↗

Reference-based phasing using the Haplotype Reference Consortium panel.Semantic proximity Read ↗

A reference panel of 64,976 haplotypes for genotype imputation.Semantic proximity Read ↗

A reference panel of 64,976 haplotypes for genotype imputationSemantic proximity Read ↗

A comparative analysis of current phasing and imputation software.Semantic proximity Read ↗

GeneImp: Fast Imputation to Large Reference Panels Using Genotype Likelihoods from Ultralow Coverage Sequencing.Semantic proximity Read ↗

A fast data-driven method for genotype imputation, phasing and local ancestry inference: MendelImpute.jl.Semantic proximity Read ↗

genipe: an automated genome-wide imputation pipeline with automatic reporting and statistical tools.Semantic proximity Read ↗

Next-generation genotype imputation service and methods.Semantic proximity Read ↗

Molgenis-impute: imputation pipeline in a box.Semantic proximity Read ↗

Extending long-range phasing and haplotype library imputation algorithms to large and heterogeneous datasets.Semantic proximity Read ↗

Fast and accurate genotype imputation in genome-wide association studies through pre-phasing.Semantic proximity Read ↗

Efficient phasing and imputation of low-coverage sequencing data using large reference panelsSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.