Article
ViralFlow: A Versatile Automated Workflow for SARS-CoV-2 Genome Assembly, Lineage Assignment, Mutations and Intrahost Variant Detection.
Viruses - 23 Jan 2022
Dezordi Filipe Zimmer, Neto Antonio Marinho da Silva, Campos Túlio de Lima, Jeronimo Pedro Miguel Carneiro, Aksenen Cleber Furtado, Almeida Suzana Porto, Wallau Gabriel Luz, On Behalf Of The Fiocruz Covid-Genomic Surveillance Network
Abstract excerpt
The COVID-19 pandemic is driven by Severe Acute Respiratory Syndrome coronavirus 2 (SARS-CoV-2) that emerged in 2019 and quickly spread worldwide. Genomic surveillance has become the gold standard methodology used to monitor and study this fast-spreading virus and its constantly emerging lineages. The current deluge of SARS-CoV-2 genomic data generated worldwide has put additional pressure on the urgent need for...
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