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Accommodating individual travel history and unsampled diversity in Bayesian phylogeographic inference of SARS-CoV-2

9 Oct 2020

Abstract excerpt

Spatiotemporal bias in genome sampling can severely confound discrete trait phylogeographic inference. This has impeded our ability to accurately track the spread of SARS-CoV-2, the virus responsible for the COVID-19 pandemic, despite the availability of unprecedented numbers of SARS-CoV-2 genomes. Here, we present an approach to integrate individual travel history data in Bayesian phylogeographic inference and...

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PMID: 33037213
DOI: 10.1038/s41467-020-18877-9

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