Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Assessment of fecal DNA extraction protocols for metagenomic studies

1 Jul 2020

Abstract excerpt

BACKGROUND: Shotgun metagenomic sequencing has improved our understanding of the human gut microbiota. Various DNA extraction methods have been compared to find protocols that robustly and most accurately reflect the original microbial community structures. However, these recommendations can be further refined by considering the time and cost demands in dealing with samples from very large human cohorts....

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Clostridium difficile and Clostridium perfringens research
Share to Fecal contamination and water quality
Share to Gut microbiota and health

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Source

Identifiers

PMID: 32657325
DOI: 10.1093/gigascience/giaa071

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Assessment of fecal DNA extraction protocols for metagenomic studiesPMID 32657325Read ↗

Evaluation of fecal DNA extraction protocols for human gut microbiome studiesSemantic proximity Read ↗

A comparison of six DNA extraction protocols for 16S, ITS, and shotgun metagenomic sequencing of microbial communitiesSemantic proximity Read ↗

High-throughput DNA extraction strategy for fecal microbiome studiesSemantic proximity Read ↗

Assessment of DNA extraction methods for human gut mycobiome analysisSemantic proximity Read ↗

A unique and reliable fecal DNA extraction method for 16S rRNA gene and shotgun metagenomic sequencing in the analysis of the human gut microbiomeSemantic proximity Read ↗

The Impact of DNA Extraction Methods on Stool Bacterial and Fungal Microbiota Community RecoverySemantic proximity Read ↗

Choice of DNA extraction method affects stool microbiome recovery and subsequent phenotypic association analysesSemantic proximity Read ↗

Evaluating variation in human gut microbiota profiles due to DNA extraction method and inter-subject differencesSemantic proximity Read ↗

Comparison of DNA extraction methods for 16S rRNA gene sequencing in the analysis of the human gut microbiomeSemantic proximity Read ↗

A Comparison of Three Automated Nucleic Acid Extraction Systems for Human Stool SamplesSemantic proximity Read ↗

Fecal Microbiota Analysis: An Overview of Sample Collection Methods and Sequencing StrategiesSemantic proximity Read ↗

Choice of bacterial DNA extraction method from fecal material influences community structure as evaluated by metagenomic analysisSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.