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OpenVax: An Open-Source Computational Pipeline for Cancer Neoantigen Prediction.

Methods in molecular biology (Clifton, N.J.) - 1 Jan 2020

Kodysh Julia, Rubinsteyn Alex

Abstract excerpt

OpenVax is a computational workflow for identifying somatic variants, predicting neoantigens, and selecting the contents of personalized cancer vaccines. It is a Dockerized end-to-end pipeline that takes as input raw tumor/normal sequencing data. It is currently used in three clinical trials (NCT02721043, NCT03223103, and NCT03359239). In this chapter, we describe how to install and use OpenVax, as well as how to...

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PMID: 32124317
DOI: 10.1007/978-1-0716-0327-7_10

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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