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Article

CloudASM: an ultra-efficient cloud-based pipeline for mapping allele-specific DNA methylation.

Bioinformatics (Oxford, England) - 1 Jun 2020

Dumont Emmanuel L P, Tycko Benjamin, Do Catherine

Abstract excerpt

SUMMARY: Methods for quantifying the imbalance in CpG methylation between alleles genome-wide have been described but their algorithmic time complexity is quadratic and their practical use requires painstaking attention to infrastructure choice, implementation and execution. To solve this problem, we developed CloudASM, a scalable, ultra-efficient, turn-key, portable pipeline on Google Cloud Platform (GCP) that...

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PMID: 32119067
DOI: 10.1093/bioinformatics/btaa149
PMCID: PMC7267820

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

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