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Core/Whole Genome Multilocus Sequence Typing and Core Genome SNP-Based Typing of OXA-48-Producing Klebsiella pneumoniae Clinical Isolates From Spain

31 Jan 2020

Abstract excerpt

Whole-genome sequencing (WGS)-based typing methods have emerged as promising and highly discriminative epidemiological tools. In this study, we combined gene-by-gene allele calling and core genome Single Nucleotide Polymorphism (cgSNP) approaches to investigate the genetic relatedness of a well-characterized collection of OXA-48-producing K. pneumoniae isolates. We included isolates from the predominant sequence...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 32082262
DOI: 10.3389/fmicb.2019.02961

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