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Article

Rapid MinION profiling of preterm microbiota and antimicrobial-resistant pathogens

16 Dec 2019

Abstract excerpt

The MinION sequencing platform offers near real-time analysis of DNA sequence; this makes the tool attractive for deployment in fieldwork or clinical settings. We used the MinION platform coupled to the NanoOK RT software package to perform shotgun metagenomic sequencing and profile mock communities and faecal samples from healthy and ill preterm infants. Using Nanopore data, we reliably classified a 20-species...

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Share to Bacterial Identification and Susceptibility Testing
Share to Neonatal and Maternal Infections
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PMID: 31844297
DOI: 10.1038/s41564-019-0626-z

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