Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

VDJbase: an adaptive immune receptor genotype and haplotype database

1 Oct 2019

Abstract excerpt

VDJbase is a publicly available database that offers easy searching of data describing the complete sets of gene sequences (genotypes and haplotypes) inferred from adaptive immune receptor repertoire sequencing datasets. VDJbase is designed to act as a resource that will allow the scientific community to explore the genetic variability of the immunoglobulin (Ig) and T cell receptor (TR) gene loci. It can also...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Immune Cell Function and Interaction
Share to Monoclonal and Polyclonal Antibodies Research
Share to T-cell and B-cell Immunology

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Source

Identifiers

PMID: 31602484
DOI: 10.1093/nar/gkz872

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 8 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

VDJbase: an adaptive immune receptor genotype and haplotype databasePMID 31602484Read ↗

The current landscape of adaptive immune receptor genomic and repertoire data: OGRDB and VDJbaseSemantic proximity Read ↗

Inferred Allelic Variants of Immunoglobulin Receptor Genes: A System for Their Evaluation, Documentation, and NamingSemantic proximity Read ↗

Profiling Germline Adaptive Immune Receptor Repertoire with gAIRR SuiteSemantic proximity Read ↗

Allele frequency net: a database and online repository for immune gene frequencies in worldwide populations.Semantic proximity Read ↗

The Type 1 Diabetes T Cell Receptor and B Cell Receptor Repository in the AIRR Data Commons: a practical guide for access, use and contributions through the Type 1 Diabetes AIRR ConsortiumSemantic proximity Read ↗

T Cell Receptor Beta Germline Variability is Revealed by Inference From Repertoire DataSemantic proximity Read ↗

Unmasking Human T Cell Receptor Germline Diversity: 335 Novel Alleles Identified in 47 Pangenome Reference Individuals Using the gAIRR SuiteSemantic proximity Read ↗

A Database of Human Immune Receptor Alleles Recovered from Population Sequencing Data.Semantic proximity Read ↗

IGHV allele similarity clustering improves genotype inference from adaptive immune receptor repertoire sequencing dataSemantic proximity Read ↗

IGHV allele similarity clustering improves genotype inference from adaptive immune receptor repertoire sequencing data.Semantic proximity Read ↗

The development of a database and bioinformatics applications for the investigation of immune genesSemantic proximity Read ↗

Allele Frequency Net Database.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.