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Article

A Perfect Match Genomic Landscape Provides a Unified Framework for the Precise Detection of Variation in Natural and Synthetic Haploid Genomes.

Genetics - 1 Apr 2018

Palacios-Flores Kim, García-Sotelo Jair, Castillo Alejandra, Uribe Carina, Aguilar Luis, Morales Lucía, Gómez-Romero Laura, Reyes José, Garciarubio Alejandro, Boege Margareta, Dávila Guillermo

Abstract excerpt

We present a conceptually simple, sensitive, precise, and essentially nonstatistical solution for the analysis of genome variation in haploid organisms. The generation of a Perfect Match Genomic Landscape (PMGL), which computes intergenome identity with single nucleotide resolution, reveals signatures of variation wherever a query genome differs from a reference genome. Such signatures encode the precise location...

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Identifiers

PMID: 29367403
DOI: 10.1534/genetics.117.300589
PMCID: PMC5887153

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