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Comparison of phenotypic and WGS-derived antimicrobial resistance profiles of Salmonella enterica serovars Typhi and Paratyphi.

The Journal of antimicrobial chemotherapy - 1 Feb 2018

Day Martin R, Doumith Michel, Do Nascimento Vivienne, Nair Satheesh, Ashton Philip M, Jenkins Claire, Dallman Timothy J, Stevens Flora J, Freedman Joanne, Hopkins Katie L, Woodford Neil, De Pinna Elizabeth M, Godbole Gauri

Abstract excerpt

Objectives: Surveillance of antimicrobial resistance (AMR) in Salmonella enterica serovars Typhi and Paratyphi is essential to provide an evidence base for empirical treatment protocols and to monitor emerging AMR. We sought to compare phenotypic and WGS-based genotypic methods for the detection of AMR in Salmonella Typhi and Salmonella Paratyphi. Methods: WGS data from 603 isolates of Salmonella Typhi (n = 332)...

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PMID: 29216342
DOI: 10.1093/jac/dkx379

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