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Whole genome sequencing (WGS) fails to detect antimicrobial resistance (AMR) from heteroresistant subpopulation of Salmonella enterica.

Food microbiology - 1 Oct 2020

Zwe Ye Htut, Chin Seow Fong, Kohli Gurjeet Singh, Aung Kyaw Thu, Yang Liang, Yuk Hyun-Gyun

Abstract excerpt

Due to rapidly falling costs, whole genome sequencing (WGS) is becoming an essential tool in the surveillance of antimicrobial resistance (AMR) in Salmonella enterica. Although there have been many recent works evaluating the accuracy of WGS in predicting AMR from a large number of Salmonella isolates, little attention has been devoted to deciphering the underlying causes of disagreement between the WGS genotype...

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PMID: 32539974
DOI: 10.1016/j.fm.2020.103530

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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