Article
Predicting RNA hyper-editing with a novel tool when unambiguous alignment is impossible.
BMC genomics - 10 Jul 2017
McKerrow Wilson H, Savva Yiannis A, Rezaei Ali, Reenan Robert A, Lawrence Charles E
Abstract excerpt
BACKGROUND: Repetitive elements are now known to have relevant cellular functions, including self-complementary sequences that form double stranded (ds) RNA. There are numerous pathways that determine the fate of endogenous dsRNA, and misregulation of endogenous dsRNA is a driver of autoimmune disease, particularly in the brain. Unfortunately, the alignment of high-throughput, short-read sequences to repeat...
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