Article
Heap: a highly sensitive and accurate SNP detection tool for low-coverage high-throughput sequencing data.
DNA research : an international journal for rapid publication of reports on genes and genomes - 1 Aug 2017
Kobayashi Masaaki, Ohyanagi Hajime, Takanashi Hideki, Asano Satomi, Kudo Toru, Kajiya-Kanegae Hiromi, Nagano Atsushi J, Tainaka Hitoshi, Tokunaga Tsuyoshi, Sazuka Takashi, Iwata Hiroyoshi, Tsutsumi Nobuhiro, Yano Kentaro
Abstract excerpt
Recent availability of large-scale genomic resources enables us to conduct so called genome-wide association studies (GWAS) and genomic prediction (GP) studies, particularly with next-generation sequencing (NGS) data. The effectiveness of GWAS and GP depends on not only their mathematical models, but the quality and quantity of variants employed in the analysis. In NGS single nucleotide polymorphism (SNP)...
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