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Article

CoreSNP: an efficient pipeline for core marker profile selection from genome-wide SNP datasets in crops.

BMC plant biology - 21 Nov 2023

Dou Tingyu, Wang Chunchao, Ma Yanling, Chen Zhaoyan, Zhang Jing, Guo Ganggang

Abstract excerpt

BACKGROUND: DNA marker profiles play a crucial role in the identification and registration of germplasm, as well as in the distinctness, uniformity, and stability (DUS) testing of new plant variety protection. However, selecting minimal marker sets from large-scale SNP dataset can be challenging to distinguish a maximum number of samples. RESULTS: Here, we developed the CoreSNP pipeline using a "divide and...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 37986037
DOI: 10.1186/s12870-023-04609-w
PMCID: PMC10662547

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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