Article
Metrical Consistency NMF for Predicting Gene-Phenotype Associations.
Interdisciplinary sciences, computational life sciences - 1 Mar 2018
Han Shuai, Cai Hong, Che Dan, Zhang Yaogong, Huang Yalou, Xie Maoqiang
Abstract excerpt
Discovering gene-phenotype associations is significant to understand the disease mechanisms. Nonnegative matrix factorization (NMF) has been widely used in computational biology for its good performance and interpretability. In this paper, we proposed a novel metrical consistency NMF (MCNMF) method for candidate gene prioritization. The MCNMF method assume that phenotype similarities, calculated from various...
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