Article
rMATS-DVR: rMATS discovery of differential variants in RNA.
Bioinformatics (Oxford, England) - 15 Jul 2017
Wang Jinkai, Pan Yang, Shen Shihao, Lin Lan, Xing Yi
Abstract excerpt
MOTIVATION: RNA sequences of a gene can have single nucleotide variants (SNVs) due to single nucleotide polymorphisms (SNPs) in the genome, or RNA editing events within the RNA. By comparing RNA-seq data of a given cell type before and after a specific perturbation, we can detect and quantify SNVs in the RNA and discover SNVs with altered frequencies between distinct cellular states. Such differential variants in...
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