Article
Pedigree reconstruction from SNP data: parentage assignment, sibship clustering and beyond.
Molecular ecology resources - 1 Sept 2017
Huisman Jisca
Abstract excerpt
Data on hundreds or thousands of single nucleotide polymorphisms (SNPs) provide detailed information about the relationships between individuals, but currently few tools can turn this information into a multigenerational pedigree. I present the r package sequoia, which assigns parents, clusters half-siblings sharing an unsampled parent and assigns grandparents to half-sibships. Assignments are made after...
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