Article
3D clusters of somatic mutations in cancer reveal numerous rare mutations as functional targets.
Genome medicine - 23 Jan 2017
Gao Jianjiong, Chang Matthew T, Johnsen Hannah C, Gao Sizhi Paul, Sylvester Brooke E, Sumer Selcuk Onur, Zhang Hongxin, Solit David B, Taylor Barry S, Schultz Nikolaus, Sander Chris
Abstract excerpt
Many mutations in cancer are of unknown functional significance. Standard methods use statistically significant recurrence of mutations in tumor samples as an indicator of functional impact. We extend such analyses into the long tail of rare mutations by considering recurrence of mutations in clusters of spatially close residues in protein structures. Analyzing 10,000 tumor exomes, we identify more than 3000...
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