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Article

Benchmarking of methods for identification of antimicrobial resistance genes in bacterial whole genome data.

The Journal of antimicrobial chemotherapy - 1 Sept 2016

Clausen Philip T L C, Zankari Ea, Aarestrup Frank M, Lund Ole

Abstract excerpt

OBJECTIVES: Next generation sequencing (NGS) may be an alternative to phenotypic susceptibility testing for surveillance and clinical diagnosis. However, current bioinformatics methods may be associated with false positives and negatives. In this study, a novel mapping method was developed and benchmarked to two different methods in current use for identification of antibiotic resistance genes in bacterial WGS...

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PMID: 27365186
DOI: 10.1093/jac/dkw184

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NHS

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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