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Article

Codon usage bias in phylum Actinobacteria: relevance to environmental adaptation and host pathogenicity.

Research in microbiology - 1 Oct 2016

Lal Devi, Verma Mansi, Behura Susanta K, Lal Rup

Abstract excerpt

Actinobacteria are Gram-positive bacteria commonly found in soil, freshwater and marine ecosystems. In this investigation, bias in codon usages of ninety actinobacterial genomes was analyzed by estimating different indices of codon bias such as Nc (effective number of codons), SCUO (synonymous codon usage order), RSCU (relative synonymous codon usage), as well as sequence patterns of codon contexts. The results...

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PMID: 27349345
DOI: 10.1016/j.resmic.2016.06.003

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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