Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Genome and network visualization facilitates the analyses of the effects of drugs and mutations on protein-protein and drug-protein networks.

BMC bioinformatics - 2 Mar 2016

Céol Arnaud, Verhoef Lisette G G C, Wade Mark, Muller Heiko

Abstract excerpt

BACKGROUND: Biologists generally interrogate genomics data using web-based genome browsers that have limited analytical potential. New generation genome browsers such as the Integrated Genome Browser (IGB) have largely overcome this limitation and permit customized analyses to be implemented using plugins. We illustrate the use of a plugin for IGB that exploits advanced visualization techniques to integrate the...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Computer Graphics
Share to Databases, Factual

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Gene Regulatory Networks

Share to Genome, Human

Share to Genomics

Share to Pharmaceutical Preparations

Share to Protein Interaction Maps

Share to Proteins

Source

Open in PubMed Open full text

Identifiers

PMID: 26961139
DOI: 10.1186/s12859-016-0908-x
PMCID: PMC4896239

Genes

MDM2

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Genome and network visualization facilitates the analyses of the effects of drugs and mutations on protein-protein and drug-protein networks.PMID 26961139Read ↗

A patient-centric knowledge graph approach to prioritize mutants for selective anti-cancer targetingSemantic proximity Read ↗

OncoMORPHIA: An Integrated Web Platform for Interactive 3D Visualization and Functional Annotation of Cancer MutationsSemantic proximity Read ↗

MuPIT interactive: webserver for mapping variant positions to annotated, interactive 3D structures.Semantic proximity Read ↗

3DVizSNP: a tool for rapidly visualizing missense mutations identified in high throughput experiments in iCn3D.Semantic proximity Read ↗

Visualization of drug target interactions in the contexts of pathways and networks with ReactomeFIVizSemantic proximity Read ↗

Protein-protein interaction networks studies and importance of 3D structure knowledge.Semantic proximity Read ↗

DisCanVis: Visualizing integrated structural and functional annotations to better understand the effect of cancer mutations located within disordered proteins.Semantic proximity Read ↗

MutDB services: interactive structural analysis of mutation data.Semantic proximity Read ↗

iCAVE: an open source tool for immersive 3D visualization of complex biomolecular interaction networksSemantic proximity Read ↗

Using biological networks to integrate, visualize and analyze genomics data.Semantic proximity Read ↗

Analysis, identification and visualization of subgroups in genomics.Semantic proximity Read ↗

Structural interactomics: informatics approaches to aid the interpretation of genetic variation and the development of novel therapeutics.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.