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Article

Quantifying and Mitigating the Effect of Preferential Sampling on Phylodynamic Inference.

PLoS computational biology - 1 Mar 2016

Karcher Michael D, Palacios Julia A, Bedford Trevor, Suchard Marc A, Minin Vladimir N

Abstract excerpt

Phylodynamics seeks to estimate effective population size fluctuations from molecular sequences of individuals sampled from a population of interest. One way to accomplish this task formulates an observed sequence data likelihood exploiting a coalescent model for the sampled individuals' genealogy and then integrating over all possible genealogies via Monte Carlo or, less efficiently, by conditioning on one...

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Identifiers

PMID: 26938243
DOI: 10.1371/journal.pcbi.1004789
PMCID: PMC4777449

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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