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Article

RSAT 2015: Regulatory Sequence Analysis Tools.

Nucleic acids research - 1 Jul 2015

Medina-Rivera Alejandra, Defrance Matthieu, Sand Olivier, Herrmann Carl, Castro-Mondragon Jaime A, Delerce Jeremy, Jaeger Sébastien, Blanchet Christophe, Vincens Pierre, Caron Christophe, Staines Daniel M, Contreras-Moreira Bruno, Artufel Marie, Charbonnier-Khamvongsa Lucie, Hernandez Céline, Thieffry Denis, Thomas-Chollier Morgane, van Helden Jacques

Abstract excerpt

RSAT (Regulatory Sequence Analysis Tools) is a modular software suite for the analysis of cis-regulatory elements in genome sequences. Its main applications are (i) motif discovery, appropriate to genome-wide data sets like ChIP-seq, (ii) transcription factor binding motif analysis (quality assessment, comparisons and clustering), (iii) comparative genomics and (iv) analysis of regulatory variations. Nine new...

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Identifiers

PMID: 25904632
DOI: 10.1093/nar/gkv362
PMCID: PMC4489296

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026. Manifest publication-graph-cohort-2026-09-05.1.

Source receipt: pubmed, retrieved 5 Sept 2026.

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