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Article

Estimating Protistan Diversity Using High-Throughput Sequencing.

The Journal of eukaryotic microbiology - 1 Jan 2000

Hu Sarah K, Liu Zhenfeng, Lie Alle A Y, Countway Peter D, Kim Diane Y, Jones Adriane C, Gast Rebecca J, Cary S Craig, Sherr Evelyn B, Sherr Barry F, Caron David A

Abstract excerpt

Sequencing hypervariable regions from the 18S rRNA gene is commonly employed to characterize protistan biodiversity, yet there are concerns that short reads do not provide the same taxonomic resolution as full-length sequences. A total of 7,432 full-length sequences were used to perform an in silico analysis of how sequences of various lengths and target regions impact downstream ecological interpretations....

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Source

Identifiers

PMID: 25851049
DOI: 10.1111/jeu.12217

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

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