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Article

RIG: Recalibration and interrelation of genomic sequence data with the GATK.

G3 (Bethesda, Md.) - 13 Feb 2015

McCormick Ryan F, Truong Sandra K, Mullet John E

Abstract excerpt

Recent advances in variant calling made available in the Genome Analysis Toolkit (GATK) enable the use of validated single-nucleotide polymorphisms and indels to improve variant calling. However, large collections of variants for this purpose often are unavailable to research communities. We introduce a workflow to generate reliable collections of single-nucleotide polymorphisms and indels by leveraging available...

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Identifiers

PMID: 25681258
DOI: 10.1534/g3.115.017012
PMCID: PMC4390580

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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