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Article

Reference-free detection of isolated SNPs.

Nucleic acids research - 1 Jan 2015

Uricaru Raluca, Rizk Guillaume, Lacroix Vincent, Quillery Elsa, Plantard Olivier, Chikhi Rayan, Lemaitre Claire, Peterlongo Pierre

Abstract excerpt

Detecting single nucleotide polymorphisms (SNPs) between genomes is becoming a routine task with next-generation sequencing. Generally, SNP detection methods use a reference genome. As non-model organisms are increasingly investigated, the need for reference-free methods has been amplified. Most of the existing reference-free methods have fundamental limitations: they can only call SNPs between exactly two...

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PMID: 25404127
DOI: 10.1093/nar/gku1187
PMCID: PMC4333369

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026. Manifest publication-graph-cohort-2026-09-05.1.

Source receipt: pubmed, retrieved 5 Sept 2026.

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