Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Identification of Single Nucleotide Polymorphism from Insect Genomic Data.

Methods in molecular biology (Clifton, N.J.) - 1 Jan 2025

Lozada-Chávez Alejandro Nabor, Bonizzoni Mariangela

Abstract excerpt

Single nucleotide polymorphisms (SNPs) are the most common type of genetic variation among individuals. SNPs are widely used to estimate genomic divergence, population structure, and natural selection, as well as to identify associations between genomic variants and phenotypic traits. However, the identification of SNPs in non-model species or from field-derived samples may still be challenging and would benefit...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Aedes
Share to Computational Biology
Share to Genome, Insect

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Genomics

Share to High-Throughput Nucleotide Sequencing

Share to Insecta

Share to Sequence Analysis, DNA

Share to Software

Source

Identifiers

PMID: 40828273
DOI: 10.1007/978-1-0716-4583-3_2

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 17 Oct 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Identification of Single Nucleotide Polymorphism from Insect Genomic Data.PMID 40828273Read ↗

Genome-wide SNPs lead to strong signals of geographic structure and relatedness patterns in the major arbovirus vector, Aedes aegypti.Semantic proximity Read ↗

A beginners guide to SNP calling from high-throughput DNA-sequencing data.Semantic proximity Read ↗

Reference-free detection of isolated SNPs.Semantic proximity Read ↗

SNP-sites: rapid efficient extraction of SNPs from multi-FASTA alignments.Semantic proximity Read ↗

Snpdat: easy and rapid annotation of results from de novo snp discovery projects for model and non-model organisms.Semantic proximity Read ↗

Calling SNPs without a reference sequence.Semantic proximity Read ↗

SNP Discovery from Single and Multiplex Genome Assemblies of Non-model Organisms.Semantic proximity Read ↗

Affordable assays for genotyping single nucleotide polymorphisms in insects.Semantic proximity Read ↗

From next-generation resequencing reads to a high-quality variant data set.Semantic proximity Read ↗

De novo identification, differential analysis and functional annotation of SNPs from RNA-seq data in non-model speciesSemantic proximity Read ↗

Bioinformatics: identification of markers from next-generation sequence data.Semantic proximity Read ↗

4Pipe4--A 454 data analysis pipeline for SNP detection in datasets with no reference sequence or strain information.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.