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Article

Calling SNPs without a reference sequence.

BMC bioinformatics - 15 Mar 2010

Ratan Aakrosh, Zhang Yu, Hayes Vanessa M, Schuster Stephan C, Miller Webb

Abstract excerpt

BACKGROUND: The most common application for the next-generation sequencing technologies is resequencing, where short reads from the genome of an individual are aligned to a reference genome sequence for the same species. These mappings can then be used to identify genetic differences among individuals in a population, and perhaps ultimately to explain phenotypic variation. Many algorithms capable of aligning...

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Identifiers

PMID: 20230626
DOI: 10.1186/1471-2105-11-130
PMCID: PMC2851604

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