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Article

Evaluation of variant identification methods for whole genome sequencing data in dairy cattle.

BMC genomics - 1 Nov 2014

Baes Christine F, Dolezal Marlies A, Koltes James E, Bapst Beat, Fritz-Waters Eric, Jansen Sandra, Flury Christine, Signer-Hasler Heidi, Stricker Christian, Fernando Rohan, Fries Ruedi, Moll Juerg, Garrick Dorian J, Reecy James M, Gredler Birgit

Abstract excerpt

BACKGROUND: Advances in human genomics have allowed unprecedented productivity in terms of algorithms, software, and literature available for translating raw next-generation sequence data into high-quality information. The challenges of variant identification in organisms with lower quality reference genomes are less well documented. We explored the consequences of commonly recommended preparatory steps and the...

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Identifiers

PMID: 25361890
DOI: 10.1186/1471-2164-15-948
PMCID: PMC4289218

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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