Article
The empirical codon mutation matrix as a communication channel.
BMC bioinformatics - 22 Mar 2014
Nigatu Dawit, Mahmood Attiya, Henkel Werner
Abstract excerpt
BACKGROUND: A number of evolutionary models have been widely used for sequence alignment, phylogenetic tree reconstruction, and database searches. These models focus on how sets of independent substitutions between amino acids or codons derive one protein sequence from its ancestral sequence during evolution. In this paper, we regard the Empirical Codon Mutation (ECM) Matrix as a communication channel and compute...
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