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Article

snp-search: simple processing, manipulation and searching of SNPs from high-throughput sequencing.

BMC bioinformatics - 19 Nov 2013

Al-Shahib Ali, Underwood Anthony

Abstract excerpt

BACKGROUND: A typical bacterial pathogen genome mapping project can identify thousands of single nucleotide polymorphisms (SNP). Interpreting SNP data is complex and it is difficult to conceptualise the data contained within the large flat files that are the typical output from most SNP calling algorithms. One solution to this problem is to construct a database that can be queried using simple commands so that...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 24246037
DOI: 10.1186/1471-2105-14-326
PMCID: PMC3840589

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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