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Article

Effects of reduced panel, reference origin, and genetic relationship on imputation of genotypes in Hereford cattle.

Journal of animal science - 1 Dec 2012

Huang Y, Maltecca C, Cassady J P, Alexander L J, Snelling W M, MacNeil M D

Abstract excerpt

The objective of this study was to investigate alternative methods of designing and using reduced SNP panels for imputing SNP genotypes. Two purebred Hereford populations, an experimental population known as Line 1 Hereford (L1, n = 240) and registered Hereford with American Hereford Association (AHA, n = 311), were used. Using different reference samples of 62 to 311 animals with 39,497 SNP on 29 autosomes and...

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PMID: 22859753
DOI: 10.2527/jas.2011-4728

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MAF

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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