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Article

Evaluation of developed low-density genotype panels for imputation to higher density in independent dairy and beef cattle populations.

Journal of animal science - 1 Mar 2016

Judge M M, Kearney J F, McClure M C, Sleator R D, Berry D P

Abstract excerpt

The objective of this study was to develop, using alternative algorithms, low-density SNP genotyping panels (384 to 12,000 SNP), which can be accurately imputed to higher-density panels across independent cattle populations. Single nucleotide polymorphisms were selected based on genomic characteristics (i.e., linkage disequilibrium [LD], minor allele frequency [MAF], and genomic distance) in a population of 1,267...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 27065257
DOI: 10.2527/jas.2015-0044

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MAF

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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