Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Minim typing--a rapid and low cost MLST based typing tool for Klebsiella pneumoniae.

PloS one - 1 Jan 2012

Andersson Patiyan, Tong Steven Y C, Bell Jan M, Turnidge John D, Giffard Philip M

Abstract excerpt

Here we report a single nucleotide polymorphism (SNP) based genotyping method for Klebsiella pneumoniae utilising high-resolution melting (HRM) analysis of fragments within the multilocus sequence typing (MLST) loci. The approach is termed mini-MLST or Minim typing and it has previously been applied to Streptococcus pyogenes, Staphylococcus aureus and Enterococcus faecium. Six SNPs were derived from concatenated...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Australia
Share to Bacterial Typing Techniques
Share to Base Composition

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Computational Biology

Share to Klebsiella pneumoniae

Share to Multilocus Sequence Typing

Share to Real-Time Polymerase Chain Reaction

Share to Transition Temperature

Source

Open in PubMed Open full text

Identifiers

PMID: 22428067
DOI: 10.1371/journal.pone.0033530
PMCID: PMC3299796

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Minim typing--a rapid and low cost MLST based typing tool for Klebsiella pneumoniae.PMID 22428067Read ↗

Rapid high-resolution melting genotyping scheme for Escherichia coli based on MLST derived single nucleotide polymorphisms.Semantic proximity Read ↗

Identification of highly variable sequence fragments in unmapped reads for rapid bacterial genotyping.Semantic proximity Read ↗

Preliminary validation of a novel high-resolution melt-based typing method based on the multilocus sequence typing scheme of Streptococcus pyogenes.Semantic proximity Read ↗

High-resolution melting genotyping of Enterococcus faecium based on multilocus sequence typing derived single nucleotide polymorphisms.Semantic proximity Read ↗

Melt analysis of mismatch amplification mutation assays (Melt-MAMA): a functional study of a cost-effective SNP genotyping assay in bacterial models.Semantic proximity Read ↗

Molecular Epidemiology of Mycoplasma pneumoniae: Genotyping Using Single Nucleotide Polymorphisms and SNaPshot Technology.Semantic proximity Read ↗

The utility of high-resolution melting analysis of SNP nucleated PCR amplicons--an MLST based Staphylococcus aureus typing scheme.Semantic proximity Read ↗

Neighbour Typing Using Long Read Sequencing Provides Rapid Prediction of Sequence Type and Antimicrobial Susceptibility of <i>Klebsiella pneumoniae</i>Semantic proximity Read ↗

Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing.Semantic proximity Read ↗

Global phylogeny of Shigella sonnei strains from limited single nucleotide polymorphisms (SNPs) and development of a rapid and cost-effective SNP-typing scheme for strain identification by high-resolution melting analysis.Semantic proximity Read ↗

Multilocus sequence typing database for Streptococcus agalactiae contains a spurious allele of the transketolase gene.Semantic proximity Read ↗

Rapid heuristic inference of antibiotic resistance and susceptibility by genomic neighbor typingSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.