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Development of EST derived SSRs and SNPs as a genomic resource in Indian catfish, Clarias batrachus.

Molecular biology reports - 1 May 2012

Mohindra Vindhya, Singh Akanksha, Barman A S, Tripathi Ratnesh, Sood Neeraj, Lal Kuldeep K

Abstract excerpt

Clarias batrachus, an Indian catfish species, is endemic to the Indian subcontinent and potential cultivable species. The genomic resources in C. batrachus in the form of ESTs containing microsatellite repeats (EST-SSR) and single nucleotide polymorphisms (SNPs) that are associated with the expressed genes from spleen were mined. From a total of 1,937 ESTs generated, 1,698 unique sequences were obtained, out of...

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Catfishes
Dinucleotide Repeats
Expressed Sequence Tags
Genetic Loci
India

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Molecular Sequence Annotation

Trinucleotide Repeats

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PMID: 22207175
DOI: 10.1007/s11033-011-1404-z

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