Article
Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies.
Genome biology - 22 Jan 2010
Wang Shaolin, Peatman Eric, Abernathy Jason, Waldbieser Geoff, Lindquist Erika, Richardson Paul, Lucas Susan, Wang Mei, Li Ping, Thimmapuram Jyothi, Liu Lei, Vullaganti Deepika, Kucuktas Huseyin, Murdock Christopher, Small Brian C, Wilson Melanie, Liu Hong, Jiang Yanliang, Lee Yoona, Chen Fei, Lu Jianguo, Wang Wenqi, Xu Peng, Somridhivej Benjaporn, Baoprasertkul Puttharat, Quilang Jonas, Sha Zhenxia, Bao Baolong, Wang Yaping, Wang Qun, Takano Tomokazu, Nandi Samiran, Liu Shikai, Wong Lilian, Kaltenboeck Ludmilla, Quiniou Sylvie, Bengten Eva, Miller Norman, Trant John, Rokhsar Daniel, Liu Zhanjiang
Abstract excerpt
BACKGROUND: Through the Community Sequencing Program, a catfish EST sequencing project was carried out through a collaboration between the catfish research community and the Department of Energy's Joint Genome Institute. Prior to this project, only a limited EST resource from catfish was available for the purpose of SNP identification. RESULTS: A total of 438,321 quality ESTs were generated from 8 channel catfish...
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