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Transcriptome analysis of the gill of Takifugu rubripes using Illumina sequencing for discovery of SNPs.

Comparative biochemistry and physiology. Part D, Genomics & proteomics - 1 Jun 2014

Cui Jun, Wang Hongdi, Liu Shikai, Qiu Xuemei, Jiang Zhiqiang, Wang Xiuli

Abstract excerpt

Single nucleotide polymorphisms (SNPs) have become the marker of choice for genome-wide association studies in many species. High-throughput sequencing of RNA was developed primarily to analyze global gene expression, while it is an efficient way to discover SNPs from the expressed genes. In this study, we conducted transcriptome sequencing of the gill samples of Takifugu rubripes analyzed by using Illumina HiSeq...

Topics

Animals
Genome-Wide Association Study
Gills
Polymorphism, Single Nucleotide
RNA
Takifugu
Transcriptome

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Identifiers

PMID: 24747987
DOI: 10.1016/j.cbd.2014.03.001

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