Article
Fosmid-based whole genome haplotyping of a HapMap trio child: evaluation of Single Individual Haplotyping techniques.
Nucleic acids research - 1 Mar 2012
Duitama Jorge, McEwen Gayle K, Huebsch Thomas, Palczewski Stefanie, Schulz Sabrina, Verstrepen Kevin, Suk Eun-Kyung, Hoehe Margret R
Abstract excerpt
Determining the underlying haplotypes of individual human genomes is an essential, but currently difficult, step toward a complete understanding of genome function. Fosmid pool-based next-generation sequencing allows genome-wide generation of 40-kb haploid DNA segments, which can be phased into contiguous molecular haplotypes computationally by Single Individual Haplotyping (SIH). Many SIH algorithms have been...
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