Article
ACT: aggregation and correlation toolbox for analyses of genome tracks.
Bioinformatics (Oxford, England) - 15 Apr 2011
Jee Justin, Rozowsky Joel, Yip Kevin Y, Lochovsky Lucas, Bjornson Robert, Zhong Guoneng, Zhang Zhengdong, Fu Yutao, Wang Jie, Weng Zhiping, Gerstein Mark
Abstract excerpt
UNLABELLED: We have implemented aggregation and correlation toolbox (ACT), an efficient, multifaceted toolbox for analyzing continuous signal and discrete region tracks from high-throughput genomic experiments, such as RNA-seq or ChIP-chip signal profiles from the ENCODE and modENCODE projects, or lists of single nucleotide polymorphisms from the 1000 genomes project. It is able to generate aggregate profiles of...
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