Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Single nucleotide polymorphism typing of global Salmonella enterica serovar Typhi isolates by use of a hairpin primer real-time PCR assay.

Journal of clinical microbiology - 1 Oct 2010

Octavia Sophie, Lan Ruiting

Abstract excerpt

Salmonella enterica serovar Typhi is highly homogeneous. Single nucleotide polymorphisms (SNPs) have been shown to be valuable markers for molecular typing of S. enterica serovar Typhi. Here, we used a hairpin primer real-time PCR assay for SNP typing of S. enterica serovar Typhi isolates. Forty-two SNPs were selected from a comparison of 19 published S. enterica serovar Typhi genomes and sequences from other...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Bacterial Typing Techniques
Share to Cluster Analysis

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to DNA, Bacterial

Share to Genotype

Share to Phylogeny

Share to Polymerase Chain Reaction

Share to Polymorphism, Single Nucleotide

Share to Salmonella typhi

Source

Open in PubMed Open full text

Identifiers

PMID: 20668124
DOI: 10.1128/JCM.00709-10
PMCID: PMC2953126

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026. Manifest publication-graph-cohort-2026-09-05.1.

Source receipt: pubmed, retrieved 5 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Single nucleotide polymorphism typing of global Salmonella enterica serovar Typhi isolates by use of a hairpin primer real-time PCR assay.PMID 20668124Read ↗

Development and validation of a genome-informed multiplex PCR for specific detection of typhoidal <i>Salmonella</i> serovarsSemantic proximity Read ↗

Single-nucleotide-polymorphism typing and genetic relationships of Salmonella enterica serovar Typhi isolates.Semantic proximity Read ↗

A novel broadly applicable PCR-RFLP method for rapid identification and subtyping of H58 Salmonella Typhi.Semantic proximity Read ↗

Multiplex PCR Assay to Detect High Risk Lineages of <i>Salmonella</i> Typhi and Paratyphi ASemantic proximity Read ↗

High-throughput bacterial SNP typing identifies distinct clusters of Salmonella Typhi causing typhoid in Nepalese children.Semantic proximity Read ↗

An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid.Semantic proximity Read ↗

Identification of Five NovelSalmonellaTyphi-Specific Genes as Markers for Diagnosis of Typhoid Fever Using Single-Gene Target PCR AssaysSemantic proximity Read ↗

Five Years of GenoTyphi: Updates to the Global Salmonella Typhi Genotyping Framework.Semantic proximity Read ↗

Phylogenetic diversity of the enteric pathogen Salmonella enterica subsp. enterica inferred from genome-wide reference-free SNP characters.Semantic proximity Read ↗

The molecular epidemiology of enteric fever in South and Southeast AsiaSemantic proximity Read ↗

Whole genome sequence analysis of Salmonella Typhi in Papua New Guinea reveals an established population of genotype 2.1.7 sensitive to antimicrobials.Semantic proximity Read ↗

Identification of Salmonella enterica serovar Typhi genotypes by use of rapid multiplex ligation-dependent probe amplification.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.