Article
SNEP: SNP-derived epitope prediction program for minor H antigens.
Immunogenetics - 1 Dec 2005
Schuler Mathias M, Dönnes Pierre, Nastke Maria-Dorothea, Kohlbacher Oliver, Rammensee Hans-Georg, Stevanovic Stefan
Abstract excerpt
The single nucleotide polymorphism (SNP)-derived Epitope Prediction program (SNEP) is now available to the public. It predicts minor histocompatibility antigens (miHAgs), which are T-cell epitopes containing polymorphic spots, from proteins listed in the SWISS-PROT database. SNEP recognizes polymorphisms (termed VARIANT or CONFLICT in SWISS-PROT) and predicts potential T-cell epitopes within a chosen distance...
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