Article
Dissecting tBHQ induced ARE-driven gene expression through long and short oligonucleotide arrays.
Physiological genomics - 21 Mar 2005
Li Jiang, Spletter Maria L, Johnson Jeffrey A
Abstract excerpt
This paper compares the gene expression profiles identified by short (Affymetrix U95AV2) or long (Agilent Hu1A) oligonucleotide arrays on a model for upregulation of a cluster of antioxidant responsive element-driven genes by treatment with tert-butylhydroquinone. MAS 5.0, dCHIP, and RMA were applied to normalize the Affymetrix data, and Lowess regression was considered for Agilent data. SAM was used to identify...
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