Article

ReprDB and panDB: minimalist databases with maximal microbial representation

2017-11-07

Abstract excerpt

<h4>Background</h4> Profiling of shotgun metagenomic samples is hindered by a lack of unified microbial reference genome databases that i) assemble genomic information from all open access microbial genomes, ii) have relatively small sizes, and iii) are compatible to various metagenomic read mapping tools. Moreover, computational tools to rapidly compile and update such databases to accommodate the rapid increase...

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Literature Corpus work: ff8bda9f-11bc-5a79-ab21-bf2794534b5f
DOI: 10.1101/214916

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